Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGGATCAGGCCAGG
..((((((...((((((((...&))))))))...)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001323289
GeneSymbolCDKL5
Binding site11340,11358
Score0.846
Seed1
Au0.412
Energy-24.0
Binding len18
Me-10.081
Phylopstem0.397090325
Phylopflank0.08538598249999999
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end5
Position3UTR
2D Structure