Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTTCCCAGATTTGAGCCAGA
..(((((((...((((((.(((&)))))))))...))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001323289
GeneSymbolCDKL5
Binding site5622,5642
Score1.0
Seed1
Au0.676
Energy-23.5
Binding len20
Me-12.371
Phylopstem2.4445085714285715
Phylopflank0.9968942875000001
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end7
Position3UTR
2D Structure