Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCGGAGGGAGCGGCGGG
..((((((((.((((((((...&)))))))))))))..))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_047427888
GeneSymbolPEX16
Binding site1387,1406
Score0.846
Seed1
Au0.294
Energy-23.2
Binding len19
Me-7.782
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings13
Position of longest consecutive pairings6
Pairings in 3prime end5
PositionCDS
2D Structure