Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CCCTGACTTTGTAACAGAGGGAGCCAGG
..((((((((.(((((......&.))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001323304
GeneSymbolAURKA
Binding site1194,1222
Score0.885
Seed1
Au0.559
Energy-23.3
Binding len15
Me-7.782
Phylopstem5.246556
Phylopflank4.42008223625
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure