Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTTCACCCAGAAGTCCAAGGTACCAGTGT
((((((..(((((((((((.((&.)))))))))).....)))..)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001323342
GeneSymbolAHCTF1
Binding site4639,4669
Score1.0
Seed0
Au0.559
Energy-25.2
Binding len28
Me-7.795
Phylopstem0.712265125
Phylopflank0.9468189100000002
Longest consecutive pairings10
Position of longest consecutive pairings17
Pairings in 3prime end7
PositionCDS
2D Structure