Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCTCAGTTTTCACATTGAGGAGCTGGTGG
((((((((((((.((((((...&))).)))..........)))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001323374
GeneSymbolCAMK4
Binding site4904,4934
Score0.923
Seed1
Au0.559
Energy-23.4
Binding len30
Me-5.227
Phylopstem0.010834249999999995
Phylopflank0.47770531499999996
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure