Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTACAGCCACGATGGGGACAGCCTGTCTCGCTCCCAAGACCACATTCCACTGGCTGCC
..((((((((((((((((((.&))))))))))............)).............................)))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047427906
GeneSymbolPITPNM1
Binding site1594,1654
Score0.923
Seed1
Au0.353
Energy-20.5
Binding len60
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings50
Pairings in 3prime end7
PositionCDS
2D Structure