Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCGGGAGCGCCTGCTGCTCACCCGGCCCGTGTGGCTGCAGCTGCAAG
(((((((((((((((((.(((&.)))..))))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047427919
GeneSymbolRIN1
Binding site184,235
Score0.923
Seed1
Au0.294
Energy-26.4
Binding len24
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings17
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure