Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCAAGTGTGAACGGAGACGCTGCCTCCGGATTGTGGAAAGGAGCCGAGGGTGTGGAGTATGCCGGGG
.((((((((((...........&.)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001323942
GeneSymbolMBD1
Binding site805,875
Score0.923
Seed1
Au0.426
Energy-19.2
Binding len12
Me-10.255
Phylopstem1.8989230000000004
Phylopflank0.9928576722499999
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure