Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCTCCGGATTGTGGAAAGGAGCCGAGGGTGT
(((((((((((((((((((((.&)))))).........)))))))))))...)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001323942
GeneSymbolMBD1
Binding site827,861
Score0.923
Seed1
Au0.382
Energy-28.4
Binding len34
Me-3.938
Phylopstem1.1423789103030302
Phylopflank1.098476925
Longest consecutive pairings11
Position of longest consecutive pairings8
Pairings in 3prime end7
PositionCDS
2D Structure