Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACTGAGAAAGGAGGGAGTTTATTTCTGTAACCAGG
..(((((((((((((.(((...&))).))))))))).................)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001324197
GeneSymbolITCH
Binding site6725,6760
Score0.923
Seed1
Au0.559
Energy-20.9
Binding len35
Me-5.19
Phylopstem0.07281373333333332
Phylopflank0.06638984999999996
Longest consecutive pairings9
Position of longest consecutive pairings22
Pairings in 3prime end4
Position3UTR
2D Structure