Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTAGAAAAGAGGATGCCAGTC
.(((((((((((((((((....&))))))...))))).)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001324242
GeneSymbolRBM41
Binding site2141,2163
Score0.846
Seed1
Au0.603
Energy-21.5
Binding len22
Me-3.793
Phylopstem-0.021685761904761923
Phylopflank-0.0493813
Longest consecutive pairings6
Position of longest consecutive pairings16
Pairings in 3prime end4
Position3UTR
2D Structure