Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTGCATAGAAGCCATTGGGGAGTTCAGTGG
((((((((((((..(((.(...&.).)))..))))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001324337
GeneSymbolSHOC2
Binding site3481,3511
Score1.0
Seed1
Au0.574
Energy-21.0
Binding len22
Me-6.084
Phylopstem1.2166786153846154
Phylopflank2.5367810412500003
Longest consecutive pairings7
Position of longest consecutive pairings7
Pairings in 3prime end4
Position3UTR
2D Structure