Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCGGCATTCGCGGCTGCGGGGCCCGGAGTTGCTGGTAGGAGGAGTTGGCGG
(.(((((((((((((((((...&.)))))))...........)))))))))).).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001324374
GeneSymbolCMTR2
Binding site19,74
Score0.846
Seed1
Au0.426
Energy-23.2
Binding len32
Me-5.101
Phylopstem0.2240884142857143
Phylopflank0.08421135999999999
Longest consecutive pairings10
Position of longest consecutive pairings3
Pairings in 3prime end5
Position5UTR
2D Structure