Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCCGGATTCTGAGCTCAGTGT
(((((((((...((((((((((&))))))))))....)))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001324411
GeneSymbolRPUSD1
Binding site1613,1638
Score0.923
Seed1
Au0.397
Energy-29.6
Binding len25
Me-11.352
Phylopstem3.9617203000000005
Phylopflank3.2907881674999997
Longest consecutive pairings10
Position of longest consecutive pairings15
Pairings in 3prime end8
Position3UTR
2D Structure