Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCAGGGGAGCACCGGC
..(((((((((..((((((((.&))))))))))))))..))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001329477
GeneSymbolPGPEP1
Binding site6703,6723
Score0.923
Seed1
Au0.382
Energy-25.2
Binding len20
Me-9.593
Phylopstem-0.7390334272727273
Phylopflank-0.042412578749999985
Longest consecutive pairings14
Position of longest consecutive pairings6
Pairings in 3prime end7
Position3UTR
2D Structure