Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGAGCCCAGGAGGTGAAGGCTGCAATGAGCCATGA
((.(((((((((((((((((((&)))..)))))))))).............)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001329477
GeneSymbolPGPEP1
Binding site5126,5163
Score0.923
Seed0
Au0.456
Energy-23.5
Binding len37
Me-5.495
Phylopstem-0.011840911764705897
Phylopflank0.04200536249999999
Longest consecutive pairings10
Position of longest consecutive pairings22
Pairings in 3prime end8
Position3UTR
2D Structure