Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCAACGTGAAAGACCAGAAAGGCGAGGACTTCCGGCCTCCCCGTTGGCCAGG
..(((((((((((((((.....&.))))))))).......................)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001329755
GeneSymbolFAM136A
Binding site171,226
Score0.846
Seed1
Au0.353
Energy-22.9
Binding len40
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings30
Pairings in 3prime end3
Position5UTR
2D Structure