Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGGAGGGGGTCGAGG
..(((((((((((((((((...&))))))))))))))).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001329925
GeneSymbolCALM3
Binding site1106,1125
Score1.0
Seed1
Au0.368
Energy-27.8
Binding len19
Me-4.957
Phylopstem0.48611221666666665
Phylopflank-0.21195256499999998
Longest consecutive pairings15
Position of longest consecutive pairings4
Pairings in 3prime end5
Position3UTR
2D Structure