Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGAGGGGCTGCAGCGGCAGC
((((.(((((((((.(..(((&)))..).))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047428328
GeneSymbolPRICKLE1
Binding site257,279
Score0.846
Seed0
Au0.412
Energy-22.7
Binding len22
Me-8.792
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings6
Pairings in 3prime end5
Position5UTR
2D Structure