Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTCAATGTGGCCAGGG
.((((((.((((.((.((....&)))).)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001329998
GeneSymbolTRANK1
Binding site6236,6252
Score0.846
Seed1
Au0.412
Energy-17.3
Binding len16
Me-7.629
Phylopstem3.016258666666667
Phylopflank3.04382634875
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure