Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGATCTTTGTGACCAAGAACCATGTGCTGTGCCAGGA
.(((((((((....(((.((..&.)).)))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001329998
GeneSymbolTRANK1
Binding site3819,3856
Score0.923
Seed1
Au0.559
Energy-17.0
Binding len17
Me-12.111
Phylopstem1.4146666666666667
Phylopflank1.7680999999999996
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure