Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATCCCTGTTATGTTGATGCCAGA
..(((((((.((((((((....&.))))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001330062
GeneSymbolPIP4K2A
Binding site195,220
Score0.969
Seed1
Au0.618
Energy-17.8
Binding len17
Me-6.2
Phylopstem2.2009512499999997
Phylopflank2.5518603774999997
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end4
Position5UTR
2D Structure