Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGCAGATGTGGCCAGGA
.((((((.((((.((((.....&))))..)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001330069
GeneSymbolPRKD1
Binding site1933,1950
Score0.846
Seed1
Au0.426
Energy-18.1
Binding len17
Me-7.396
Phylopstem0.8341896666666666
Phylopflank3.1423630175
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure