Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACCTCTGAAAACATCCTTCAGCTGGTGAAAGCGGCCAGTGA
((((((((.(((((.((((((.&))))))......................))))).)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001330069
GeneSymbolPRKD1
Binding site657,700
Score0.846
Seed1
Au0.515
Energy-24.4
Binding len43
Me-5.729
Phylopstem4.3219725
Phylopflank3.8380820625
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure