Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCCAGTCTGTAATGCTGGAGCTAGTGG
((((((((((...(((((....&)))))...........)))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001330073
GeneSymbolMPDU1
Binding site442,469
Score0.846
Seed1
Au0.485
Energy-22.3
Binding len27
Me-11.398
Phylopstem3.6586855
Phylopflank3.5234328562500004
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure