Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTTGCCCGGAGGCCGCACCCGCCTCCGGCGGGGCTCTCAGTGA
((((((((((((((((((((((&)))))))))))).................)))))...))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001330112
GeneSymbolSHLD2
Binding site3,46
Score0.923
Seed1
Au0.397
Energy-25.1
Binding len43
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings31
Pairings in 3prime end8
Position5UTR
2D Structure