Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGATTTCAGAGCTGGC
..(((((((...(((((((...&))))))).....))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001330112
GeneSymbolSHLD2
Binding site2291,2311
Score0.923
Seed1
Au0.574
Energy-21.1
Binding len20
Me-12.371
Phylopstem2.0554922285714285
Phylopflank1.41631213375
Longest consecutive pairings7
Position of longest consecutive pairings13
Pairings in 3prime end5
PositionCDS
2D Structure