Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTACAAGGCATGCTGGGTA
(((((((((.(..((((((...&))))))..).))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001330113
GeneSymbolCACNB4
Binding site7527,7547
Score0.846
Seed1
Au0.618
Energy-20.1
Binding len20
Me-9.816
Phylopstem5.4116465555555555
Phylopflank4.82113327
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure