Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTACAAGGCATGCTGGGTA
(((((((((.(..((((((...&))))))..).))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001330116
GeneSymbolCACNB4
Binding site7790,7810
Score0.846
Seed1
Au0.618
Energy-20.1
Binding len20
Me-9.816
Phylopstem2.294840111111111
Phylopflank3.7444786437499995
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure