Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCACGGGAGGGGGCCC
....(((((((((((((((((.&))))).)))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001330125
GeneSymbolVAMP2
Binding site2241,2260
Score1.0
Seed0
Au0.397
Energy-28.8
Binding len19
Me-9.547
Phylopstem0.3802811888888889
Phylopflank0.06757920000000003
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure