Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCCAGGAAGCTCGGGATGAGCTAGTT
.((((((((..((((((((...&.)))))))).)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001330129
GeneSymbolNDEL1
Binding site262,288
Score0.923
Seed1
Au0.559
Energy-22.0
Binding len19
Me-7.861
Phylopstem3.752729125
Phylopflank4.6004143625000005
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end5
PositionCDS
2D Structure