Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCCCACTCTATTGCCCAGGCTGGAGTGCAGTGG
((((((((((..(((((((((.&.)))))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001330139
GeneSymbolTMEM220
Binding site1165,1198
Score0.923
Seed1
Au0.426
Energy-28.4
Binding len24
Me-10.109
Phylopstem0.26924592545454545
Phylopflank-0.13870330975000003
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure