Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCGGAGGGAGATCCAGA
..((((.((((((((((((...&)))))))))).)).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001330164
GeneSymbolHSPA12A
Binding site2116,2135
Score1.0
Seed0
Au0.338
Energy-23.6
Binding len19
Me-6.501
Phylopstem-0.28983942307692306
Phylopflank-0.34320382875
Longest consecutive pairings10
Position of longest consecutive pairings9
Pairings in 3prime end5
PositionCDS
2D Structure