Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATGCCAGGTG
(((((((((.............&))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001330168
GeneSymbolTSPAN31
Binding site2925,2935
Score1.0
Seed1
Au0.574
Energy-15.9
Binding len10
Me-14.466
Phylopstem-0.286816
Phylopflank-0.04875747375000002
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure