Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCATGCTCTGCCAGGA
.(((((((....((((((....&))))))....))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001330177
GeneSymbolPCNX4
Binding site17657,17675
Score0.923
Seed1
Au0.382
Energy-20.5
Binding len18
Me-12.264
Phylopstem-0.0750355142857143
Phylopflank0.06922793060000003
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure