Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCCGCCTTGTGGTCAGGTG
(((((((.(((((.((.((...&)).)).)))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001330177
GeneSymbolPCNX4
Binding site6697,6716
Score0.846
Seed1
Au0.485
Energy-16.9
Binding len19
Me-7.108
Phylopstem-0.08975042857142856
Phylopflank-0.031864437500000016
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure