Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCACCCAGGCTGGGGTGCAGTGG
((((((((((..(((((((.((&)))))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001330177
GeneSymbolPCNX4
Binding site5437,5460
Score0.923
Seed1
Au0.382
Energy-26.0
Binding len23
Me-10.109
Phylopstem-0.1163889118181818
Phylopflank-0.20697153512500005
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure