Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCGGGCGGGGCCGCGGTGA
((((((((((..(((((((...&))))))).))))))..)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001330177
GeneSymbolPCNX4
Binding site331,352
Score0.846
Seed1
Au0.324
Energy-25.0
Binding len21
Me-10.109
Phylopstem-0.41552600833333336
Phylopflank0.3269129827499997
Longest consecutive pairings7
Position of longest consecutive pairings14
Pairings in 3prime end5
Position5UTR
2D Structure