Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTCCTTTGCAGAATACCTGTCTCCACATTCCTAGAGAGGAGCCAAGTT
.(((((((((((((((((....&.))))))))))))))).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001330185
GeneSymbolSLC39A9
Binding site2153,2202
Score1.0
Seed1
Au0.559
Energy-28.7
Binding len20
Me-3.793
Phylopstem0.33551041666666664
Phylopflank0.336456615
Longest consecutive pairings15
Position of longest consecutive pairings4
Pairings in 3prime end4
Position3UTR
2D Structure