Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTCCCGGTGCCCGCAACTCCTGATCCCAACCCGCGAGAGGAGCCTCTGC
((..(((((((((((((((...&.))))).))))))))))..)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001330190
GeneSymbolHMGA2
Binding site412,461
Score1.0
Seed0
Au0.382
Energy-27.3
Binding len22
Me-8.527
Phylopstem0.34170327500000003
Phylopflank0.4677710138249999
Longest consecutive pairings10
Position of longest consecutive pairings5
Pairings in 3prime end5
Position5UTR
2D Structure