Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTACAGAGGTGCCAGC
..(((((((....(((((....&)))))...))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001330204
GeneSymbolPTPRB
Binding site6490,6506
Score0.923
Seed1
Au0.676
Energy-17.5
Binding len16
Me-13.66
Phylopstem4.542326142857143
Phylopflank4.0447080975
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure