Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACTTGGAAAGGAGCTG
....(((((((((((((((((.&))))))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001330214
GeneSymbolSTK16
Binding site2391,2409
Score1.0
Seed0
Au0.559
Energy-26.9
Binding len18
Me-9.547
Phylopstem0.8125334070588235
Phylopflank0.28377003274999996
Longest consecutive pairings17
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure