Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCTCGGAGGGAGGTGCCGGTC
.((((((.(((((((((((...&)))))))..)))).)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001330239
GeneSymbolTJP1
Binding site199,220
Score0.846
Seed1
Au0.191
Energy-23.6
Binding len21
Me-6.107
Phylopstem3.710794538461538
Phylopflank4.9912127625
Longest consecutive pairings7
Position of longest consecutive pairings14
Pairings in 3prime end5
Position5UTR
2D Structure