Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAAAAAGGAGGCAGG
..(((.(((((((.(((((...&))))).))))))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001330242
GeneSymbolACSS3
Binding site3368,3386
Score1.0
Seed0
Au0.485
Energy-25.2
Binding len18
Me-7.715
Phylopstem-0.31156114285714287
Phylopflank-0.16195286312499996
Longest consecutive pairings7
Position of longest consecutive pairings5
Pairings in 3prime end5
Position3UTR
2D Structure