Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCAAATTATGGACCCATGAAAGGGGGCAGTT
.((((.(((((((((((((...&.))))).)))))))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001330249
GeneSymbolHNRNPA3
Binding site1026,1057
Score0.846
Seed0
Au0.515
Energy-27.7
Binding len21
Me-5.694
Phylopstem4.318304371428572
Phylopflank5.0240490287499995
Longest consecutive pairings8
Position of longest consecutive pairings6
Pairings in 3prime end5
PositionCDS
2D Structure