Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATTTTAGCATTCAGGTGCCAGGA
.((((((((..(((((......&.)))))...)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001330271
GeneSymbolGCA
Binding site163,188
Score0.923
Seed1
Au0.529
Energy-18.3
Binding len18
Me-7.861
Phylopstem0.9992764749999999
Phylopflank0.46157229625000007
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end2
Position5UTR
2D Structure