Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCTGCGTCAGTGCCAGC
..(((((((...((((((((..&))))))))..))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001330289
GeneSymbolKIF1A
Binding site4625,4643
Score0.846
Seed1
Au0.426
Energy-18.8
Binding len18
Me-12.371
Phylopstem6.294050875
Phylopflank4.590763150000001
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end6
PositionCDS
2D Structure