Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCTGTGAAGTGACTGGAAGGGAGCAGAGGCCAGCTGGGGGCCAGTGG
(((((((((((..((((.(...&.).))))..))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001330294
GeneSymbolSTX5
Binding site1260,1310
Score0.846
Seed1
Au0.426
Energy-28.9
Binding len21
Me-8.574
Phylopstem4.525591818181819
Phylopflank5.0787315825
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure