Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GATGCTGCTTCCATCCTCGCAGTCTGTCTGAGGTGCCAGGTG
(((((((((......((((((.&.))))))......))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001330320
GeneSymbolSNX11
Binding site2410,2452
Score1.0
Seed1
Au0.5
Energy-20.3
Binding len23
Me-14.233
Phylopstem2.969793888888889
Phylopflank1.7264927012500002
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure